Cubit 15.3 User Documentation
Options for controlling the execution of Sculpt. Sculpt is a parallel application that uses MPI to distribute and build the hex mesh on multiple processors. The -j or num_procs option is normally used to specify the number of processors to use. Sculpt will write a separate exodus file for each processor, which can be joined into a single file using the epu utility. While any number of processors may be used, you would normally use a -j value less than or equal to the number of cores available on your hardware.
Sculpt options can be specified directly from the command line using the "short" commands, or from an input file where the longer forms of the commands are used. Since an input file can be commented and modified, it is generally the recomended method for running Sculpt.
Process Control --process -pc --num_procs, -j <args> Number of processors requested --input_file, -i <args> File containing user input data --debug_processor, -D <args> Sleep to attach to processor for debug --quiet, -qt Supress output --print_input, -pi Print input values and defaults then stop --version, -vs Print version number and exit --threads_process, -tpp <args> Number of threads per process --iproc, -ip <args> Number of processors in I direction --jproc, -jp <args> Number of processors in J direction --kproc, -kp <args> Number of processors in K direction --build_ghosts, -bg Write ghost layers to exodus files for debug Sculpt Command Summary
Command: num_procs Number of processors requested Long Name: --num_procs Short Name: -j Argument Type: integer > 0Command Description:
The number of processors that Sculpt will use to generate the mesh. The Cartesian domain will be divided into roughly equal sizes based on this value and the mesh for each portion of the domain generated independently. Continuity across processor boundaries is maintained with MPI (Message Passing Interface). Each processor will write a separate Exodus II file to disk containing its portion of the domain. The Sandia SEACAS tool, "EPU" can be used to join parallel files into a single file.
If not specified on the command line, the number of processors used will be 1.
For additional control on the arrangement of processor domains see arguments
iproc, jproc, kproc.
Input File
Command: input_file File containing user input data Long Name: --input_file Short Name: -i Argument Type: file name with pathCommand Description:
Rather than specifying a complicated series of arguments on the command line, an input file may also be used. An input file is a simple text file containing all arguments and parameters to be used in the current sculpt run. Input files are normally expected to have a ".i" extension. Arguments used in the input file are limited to the Long Names indicated for each command. User comments can also be made anywhere in the file but must follow a "$" sign. The argument assignments that are intended to be read must be contained within a "begin sculpt" and "end sculpt" block. All arguments may use upper or lower case and can optionally use "=" between the command and its parameter. The following is an example input file:
BEGIN SCULPT stl_file = "mygeom.stl" cell_size = 0.5 exodus_file = "mymesh" mesh_void = true $TRUE or ON is optional for this command END SCULPT
The following is an example of using an input file with sculpt:
sculpt -j 4 -i myinput.i
Note that the number of processors (-j) should always be used on the command
line and cannot be included in the input file. Relative or absolute paths
for files may also be used.
Debug Processor
Command: debug_processor Sleep to attach to processor for debug Long Name: --debug_processor Short Name: -D Argument Type: integer >= 0Command Description:
Used for debugging. All processes will sleep until the designated process is
attached to a debugger. Note: value of 0 corresponds to first processor, 1 to
second, etc.
Quiet
Command: quiet Supress output Long Name: --quiet Short Name: -qt Argument Type: no argumentCommand Description:
Suppress any output to the command line from Sculpt as it is running.
Print Input
Command: print_input Print input values and defaults then stop Long Name: --print_input Short Name: -pi Argument Type: no argumentCommand Description:
Display all input parameters and defaults used in the current Sculpt run to
the output window and then stop. No mesh (or volume fractions) will be
generated.
Version
Command: version Print version number and exit Long Name: --version Short Name: -vs Argument Type: no argumentCommand Description:
Prints Sculpt version information and exits.
Threads Per Processor
Command: threads_process Number of threads per process Long Name: --threads_process Short Name: -tpp Argument Type: integer > 0Command Description:
This option is currently experimental and under development. Sculpt may use
shared memory parallelism to improve performance. When built with the Kokkos
library, some algorithms in sculpt will use shared memory parallel threads in
addition to MPI distributed memory parallelism (MPI+X). Currently this option
is implemented only for surface and volume Laplacian smoothing algorithms.
This option may not be available requiring a custom build of sculpt to be
used. Check with developers if you would like to use this option.
Number of processors in I
Command: iproc Number of processors in I direction Long Name: --iproc Short Name: -ip Argument Type: integer > 0Command Description:
Arguments iproc, jproc and kproc provide user control over the processor
decomposition in I, J, and K directions respectively. iproc * jproc * kproc
must equal the number of processors specified on the command line using the
-j option.
Number of processors in J
Command: jproc Number of processors in J direction Long Name: --jproc Short Name: -jp Argument Type: integer > 0Command Description:
Arguments iproc, jproc and kproc provide user control over the processor
decomposition in I, J, and K directions respectively. iproc * jproc * kproc
must equal the number of processors specified on the command line using the
-j option.
Number of processors in K
Command: kproc Number of processors in K direction Long Name: --kproc Short Name: -kp Argument Type: integer > 0Command Description:
Arguments iproc, jproc and kproc provide user control over the processor
decomposition in I, J, and K directions respectively. iproc * jproc * kproc
must equal the number of processors specified on the command line using the
-j option.
Write the ghost layers for debug
Command: build_ghosts Write ghost layers to exodus files for debug Long Name: --build_ghosts Short Name: -bg Argument Type: no argumentCommand Description:
If set, this option will dump the ghost hexes at the boundaries of processor domains to the exodus files. This is used only for debugging.